Having issues with my rig

[Nova]

Guitar into Tuner-Noise Gate-Wah-Whammy----Guitar In

Gtr Out into Loop #1 In.

Loop #1 Octave

Loop #1 Out to Amp

Loop #2 In to Effects Loop Send
Loop #2 Chorus
Loop#3 Reverb
Loop #4 Boost
Loop #6 Delay
Loop #6 to Effect Loop Return

For some reason I'm still getting a lite chorus tone through my rig even with it not on. Also wanna control the switch of my whammy with the GC but not the expression. Can this work?

[nyteowl]

Guitar into Tuner-Noise Gate-Wah-Whammy----Guitar In

Gtr Out into Loop #1 In.

Loop #1 Octave

Loop #1 Out to Amp

Loop #2 In to Effects Loop Send
Loop #2 Chorus
Loop#3 Reverb
Loop #4 Boost
Loop #6 Delay
Loop #6 to Effect Loop Return

For some reason I'm still getting a lite chorus tone through my rig even with it not on. Also wanna control the switch of my whammy with the GC but not the expression. Can this work?

I don't know what's causing your chorus issue, but if you change your signal routing as follows you can control the whammy with your GC:

Guiter -> Tuner -> Noise Gate Tuner -> Wah -> Loop 7 In
Loop 7 Send -> Whammy In
Wammy Out -> Loop 7 Return
Loop 7 Out -> Guitar In

Now you can leave the Whammy on all the time and add or remove it from the signal chain using Loop 7.